Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918537.1_cds_XP_016467977.1_60666
CDS Infomation

[gene=LOC107790554] [db_xref=GeneID:107790554] [protein=probable disease resistance protein RF45 isoform X2] [protein_id=XP_016467977.1] [location=join(1722..1803,2119..2727,3649..3887,3921..5370,5541..5632)] [gbkey=CDS]
Sequence

ATGAAGGAGCTCGAAATCTTCTTTGCCATGGAAAGATTTCGTCGGTTGTCCGATGAAGAA
ACAACAGCAGATATTGGGTTAGAATTAACAGAGAAAGACGAATGGGAAAGGCTCGATTAT
TACAGTCGGCCAGATCGTAATTCCATTGGGTTGAAGGAAGATAAAGTTCAGGTTATCGAA
TATCTAATGGACGAGTCCGAGGACTTAAAAGTCATTTCACTATGTGGATCTGGCGGAGTG
GGAAAGACAACTCTTGCTTACGAGATCTATGATCACCCTGAGATTTGGTACAAATTTCTT
CATAGAATCTGGATTCCCGTATCTTCCACGTTTAACCCGGGAAACATCCTTCTGCATATT
GCTCGCTATTTTGACAGAAAAAATTGTACCGATAAATCAGAAGATCAGCTGGTTGATATA
ATCTTTAGAAAACTTAGTGAAGGTGGAAGATTCCTGTTTGTTCTAGATGATATATGGTCT
ACTGAAGTTCTGGATGAACTGCAGCGTATACTCTTAGATGACCGTTTCTCACCAATTACC
AACAAGGGTCACAGAATATTGCTTACGACGCGGAAGAGACAAGTTACTGAATATGGTTTT
CTGAAGCCACAATCCGTCTACACTGTGCGCGGACTGAAGGAAAACCACGCATGGGAGTTA
CTTATGGAAGAATACCGGCGACATAATCGAGAAGATAAACTTAGCGCAGAGAAGGAGAAT
ATAGGGAGGGAGATGGTGAAACGCTGTGAAGGGGTCCCAGCGGCGATCATCAAACTCGGT
CAAGAGTTGGCAGGTAAAGAAAGCCTGGACGAGTGGAATATAGTGCATCAAAACTTAATG
TCATTTCTAACTGACAATGTACTACAAGTTTTAGCTCCAAGTTTTGATGACTTACCAGAT
CACCTCAAACTATGTTTTATTTACTTGGGCTTTTGGCCAGAAGACTCGGTGATTGACACA
GAGAAGTTATATCACTTCTGGATCGTCGAAGGCTTAGTAAAGCCGCAAGATATCAGTGTC
GCGGAGAACTATCTAACAGAACTTGCAAGGATGAGTATGGTTCATGAGGTTGAAGAAGAG
GAAGTTCCAAGTGTTAGAAGGCTCAAATTTTGCCGCATTTCCAGAATGATGCGACAACTA
TGTATATCAAAGGGTAACCAGATAAATTCCAGCCACATTGTTGATTCTCGGCTAGGTTCA
GATTTCTCTTCATCATCTTCAAGAAACAAAACACGACGATTGTTTGTGTGCCTAGAAAAG
CTAGAGGATAGCGGCATTCTGGCCAAGAAAGAGCGCACTAGGAACCTTCATAGCCTACAT
ATCCTTGACGCACACAAGCAGCAAGGTAGGACTCCTGTTCGATTGTCAGGTAAGTTTGAT
GTCGAAGAGTTAAAGCTGCTTAGACTTCTTGATTTTGATGGGGTTGATATTGTATGGGAC
GAATTATCATTTGGATTACTGGAAGGTATATCCAAGCTAGTGCACTTGAGATATTTGAGT
TTCAAGGGATGTATTTTGAATCAGTTACCATTGGCTATTAGTAATTTGTTATACTTACAA
GTACTTGACTTGCGAGTGGATGATTCGATTACTGAGGTGATTCTGCCAAACGTGCTGTGG
AAGATGAGAAAAATGAAACATCTATATCTTCCACGTATGTTTCAAACATACACCGGAGAC
AAATTGCGGTTAGATGGATTGACAGAGCTTGAGACACTAGAGAACTTCATCACAAGGGTT
TGCAACGTTACTGATCTGCAGACATTAGCCGAACTTCATAACCTAGCTGTGAAGATTGAC
GGTGATCTCACTGACCTACAGTTCATCAACGAGCATCTGAAACAACCTTCAAACAAACAG
ATCCAGTTGTCTATTGATGTCAGAAACTTTGACTGCTATGAAGATAACAGGCATTCTGCT
ATAAGGGAATTATTGCAATATCAGGCTGTTCGAATCATTTGCATTGAGGGGCATATCCGT
GAGCTGCCATCGAAAAACAAAATCTCCCCAAGTTTGACTAAGTTAGTCCTGATTGGCTCT
GAACTTGAGAAAGATCCCACGGAGAAGTTATCTAAGCTTCCTAATTTACGAGTTCTAGTC
CTCGATGATAACGCTTTTGAAGGGACACATATGGTCAGTCCTCCTTCTGGTTTTACTGAA
CTCAAACGTATAGAAATATTGAATTTGATGTTTTTGGAGAGTTGGACTGTAGAAATCAAT
TCTATGCCGAAGCTCTGTAACATAAGAATTGAAAATTGCAAGAAACTGAGGATCCTACAT
GACTTGAAACTCCTTACTGCTCTCAAAAAGGTAGAGATAACAAAGATGCCTAAACCATTT
GCAGATATGCTCCACGAGATCACTTCTGCGAGAATTGAAGATATAACCAGATCACAAGAT
GAAGCTGAAGCCTCCTCTGGGTTTGCAAATAGCTTAATAACATTCCATGCTGCTGTCGAT
GGAAAATGGTGA

Peptide Sequence

PEP ID

XP_016467977.1
PEP Infomation

PREDICTED: probable disease resistance protein RF45 isoform X2 [Nicotiana tabacum]
Sequence

MKELEIFFAMERFRRLSDEETTADIGLELTEKDEWERLDYYSRPDRNSIGLKEDKVQVIE
YLMDESEDLKVISLCGSGGVGKTTLAYEIYDHPEIWYKFLHRIWIPVSSTFNPGNILLHI
ARYFDRKNCTDKSEDQLVDIIFRKLSEGGRFLFVLDDIWSTEVLDELQRILLDDRFSPIT
NKGHRILLTTRKRQVTEYGFLKPQSVYTVRGLKENHAWELLMEEYRRHNREDKLSAEKEN
IGREMVKRCEGVPAAIIKLGQELAGKESLDEWNIVHQNLMSFLTDNVLQVLAPSFDDLPD
HLKLCFIYLGFWPEDSVIDTEKLYHFWIVEGLVKPQDISVAENYLTELARMSMVHEVEEE
EVPSVRRLKFCRISRMMRQLCISKGNQINSSHIVDSRLGSDFSSSSSRNKTRRLFVCLEK
LEDSGILAKKERTRNLHSLHILDAHKQQGRTPVRLSGKFDVEELKLLRLLDFDGVDIVWD
ELSFGLLEGISKLVHLRYLSFKGCILNQLPLAISNLLYLQVLDLRVDDSITEVILPNVLW
KMRKMKHLYLPRMFQTYTGDKLRLDGLTELETLENFITRVCNVTDLQTLAELHNLAVKID
GDLTDLQFINEHLKQPSNKQIQLSIDVRNFDCYEDNRHSAIRELLQYQAVRIICIEGHIR
ELPSKNKISPSLTKLVLIGSELEKDPTEKLSKLPNLRVLVLDDNAFEGTHMVSPPSGFTE
LKRIEILNLMFLESWTVEINSMPKLCNIRIENCKKLRILHDLKLLTALKKVEITKMPKPF
ADMLHEITSARIEDITRSQDEAEASSGFANSLITFHAAVDGKW

Transcript Sequence

Gene sequence data has not been registered.